In your environment of choice, use pip to install meeglet:
pip install meeglet
from the sources
Please clone the software, consider installing the dependencies listed in the `environment.yml.
Then do in your conda/mamba environment of choice:
pip install -e .
Citation
When using our package, please cite our two reference articles:
Python implementation and covariance computation.
@article {bomatter2023,author = {Philipp Bomatter and Joseph Paillard and Pilar Garces and Joerg F Hipp and Denis A Engemann},title = {Machine learning of brain-specific biomarkers from EEG},elocation-id = {2023.12.15.571864},year = {2023},doi = {10.1101/2023.12.15.571864},publisher = {Cold Spring Harbor Laboratory},URL = {https://www.biorxiv.org/content/early/2023/12/21/2023.12.15.571864},eprint = {https://www.biorxiv.org/content/early/2023/12/21/2023.12.15.571864.full.pdf},journal = {bioRxiv}}
General methodology, MATLAB implementation and power-envelope correlations.
@article{hipp2012large,title={Large-scale cortical correlation structure of spontaneous oscillatory activity},author={Hipp, Joerg F and Hawellek, David J and Corbetta, Maurizio and Siegel, Markus and Engel, Andreas K},journal={Nature neuroscience},volume={15},number={6},pages={884--890},year={2012},publisher={Nature Publishing Group US New York}}
Related software
M/EEG features based on Morlet wavelets using the more familiar time-domain parametrization can be readily computed is sevaral major software packages for M/EEG analysis:
Bomatter, Philipp, Joseph Paillard, Pilar Garces, Joerg F Hipp, and Denis A Engemann. 2023. “Machine Learning of Brain-Specific Biomarkers from EEG.”bioRxiv.
Hipp, Joerg F, David J Hawellek, Maurizio Corbetta, Markus Siegel, and Andreas K Engel. 2012. “Large-Scale Cortical Correlation Structure of Spontaneous Oscillatory Activity.”Nature Neuroscience 15 (6): 884–90.
Morlet, J., G. Arens, E. Fourgeau, and D. Giard. 1982. “Wave Propagation and Sampling Theory—PartII: Sampling Theory and Complex Waves.”GEOPHYSICS 47 (2): 222–36. https://doi.org/10.1190/1.1441329.